Genetics & Molecular Biology1 May 2026
CRISPR/Cas9 genome editing in tomatoes: Balancing nutrition and resilience
Source PublicationScientific Publication
Primary AuthorsVats S, Jadhav H, Mahakalkar B, Patil G, Sonah H, Sharma TR, Deshmukh R.

Current agricultural breeding often hits a wall where increasing nutritional value weakens the plant's natural defences. Recent research into CRISPR/Cas9 genome editing in tomatoes targeted the β-LCY gene to boost lycopene, a vital antioxidant. While the edited plants displayed significantly higher nutrient levels, the study measured a sharp decline in their ability to handle environmental stressors.
Researchers modified three tomato genotypes, including wild varieties, to disable the enzyme that converts lycopene into other compounds. The data showed that while lycopene concentrations soared, these specific lines suffered severe wilting when exposed to cadmium stress. This suggests that the carotenoid pathway is more deeply linked to stress adaptation than previously confirmed.
Future pathways for CRISPR/Cas9 genome editing in tomatoes
In the next decade, this discovery shifts the focus from simple gene knockouts to sophisticated metabolic balancing. We are moving toward a period where:- Multiplex editing will simultaneously boost nutrients and fortify stress-response genes.
- Regionalised crop design will allow farmers to select varieties tailored for specific soil contaminants.
- Synthetic biology will likely compensate for the metabolic costs of high-nutrient production.
Cite this Article (Harvard Style)
Vats S, Jadhav H, Mahakalkar B, Patil G, Sonah H, Sharma TR, Deshmukh R. (2026). 'Genome Editing of a Carotenogenic Gene for Lycopene Enhancement Increases Heavy Metal Stress Susceptibility in Tomato (Solanum lycopersicum L.).'. Scientific Publication. Available at: https://doi.org/10.1111/ppl.70884